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» Novel structures in Stanley sequences
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BMCBI
2011
13 years 4 months ago
R2R - software to speed the depiction of aesthetic consensus RNA secondary structures
Background: With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these mol...
Zasha Weinberg, Ronald R. Breaker
SCALESPACE
2007
Springer
14 years 3 months ago
A Consistent Spatio-temporal Motion Estimator for Atmospheric Layers
In this paper, we address the problem of estimating mesoscale dynamics of atmospheric layers from satellite image sequences. Relying on a physically sound vertical decomposition of...
Patrick Héas, Étienne Mémin, ...
BMCBI
2007
175views more  BMCBI 2007»
13 years 9 months ago
CLUSS: Clustering of protein sequences based on a new similarity measure
Background: The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important. The challenge is to identify subfamilies...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski...
RECOMB
2010
Springer
13 years 11 months ago
Leveraging Sequence Classification by Taxonomy-Based Multitask Learning
In this work we consider an inference task that biologists are very good at: deciphering biological processes by bringing together knowledge that has been obtained by experiments u...
Christian Widmer, Jose Leiva, Yasemin Altun, Gunna...
SSDBM
2006
IEEE
163views Database» more  SSDBM 2006»
14 years 3 months ago
ACache: Using Caching to Improve the Performance of Multiple Sequence Alignments
Multiple sequence alignment represents a class of powerful bioinformatics tools with many uses in computational biology ranging from discovery of characteristic motifs and conserv...
Xun Tu, Kajal T. Claypool, Cindy X. Chen