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» On Complexity of Easy Predictable Sequences
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ICML
2010
IEEE
13 years 8 months ago
Structured Output Learning with Indirect Supervision
We present a novel approach for structure prediction that addresses the difficulty of obtaining labeled structures for training. We observe that structured output problems often h...
Ming-Wei Chang, Vivek Srikumar, Dan Goldwasser, Da...
NAR
2002
132views more  NAR 2002»
13 years 7 months ago
euGenes: a eukaryote genome information system
euGenes is a genome information system and database that provides a common summary of eukaryote genes and genomes, at web site http://iubio.bio.indiana.edu/eugenes/. Seven popular...
Donald G. Gilbert
NAACL
2010
13 years 5 months ago
Distributed Training Strategies for the Structured Perceptron
Perceptron training is widely applied in the natural language processing community for learning complex structured models. Like all structured prediction learning frameworks, the ...
Ryan T. McDonald, Keith Hall, Gideon Mann
WABI
2010
Springer
128views Bioinformatics» more  WABI 2010»
13 years 6 months ago
Sparsification of RNA Structure Prediction Including Pseudoknots
Background: Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still in its infancy due to high running time and space con...
Mathias Möhl, Raheleh Salari, Sebastian Will,...
BMCBI
2008
72views more  BMCBI 2008»
13 years 7 months ago
HECTAR: A method to predict subcellular targeting in heterokonts
Background: The heterokonts are a particularly interesting group of eukaryotic organisms; they include many key species of planktonic and coastal algae and several important patho...
Bernhard Gschloessl, Yann Guermeur, J. Mark Cock