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» On Compressibility of Protein Sequences
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NAR
2000
84views more  NAR 2000»
13 years 10 months ago
SRPDB (Signal Recognition Particle Database)
The Signal Recognition Particle Database (SRPDB) at http://psyche.uthct.edu/dbs/SRPDB/SRPDB.html and http://bio.lundberg.gu.se/dbs/SRPDB/SRPDB. html assists in the better understa...
Christian Zwieb, Tore Samuelsson
BMCBI
2006
75views more  BMCBI 2006»
13 years 10 months ago
A machine learning strategy to identify candidate binding sites in human protein-coding sequence
Background: The splicing of RNA transcripts is thought to be partly promoted and regulated by sequences embedded within exons. Known sequences include binding sites for SR protein...
Thomas Down, Bernard Leong, Tim J. P. Hubbard
ICASSP
2009
IEEE
14 years 4 months ago
Real-time dynamic MR image reconstruction using Kalman Filtered Compressed Sensing
In recent work, Kalman Filtered Compressed Sensing (KF-CS) was proposed to causally reconstruct time sequences of sparse signals, from a limited number of “incoherent” measure...
Chenlu Qiu, Wei Lu, Namrata Vaswani
BMCBI
2002
109views more  BMCBI 2002»
13 years 10 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
BMCBI
2006
134views more  BMCBI 2006»
13 years 10 months ago
A statistical score for assessing the quality of multiple sequence alignments
Background: Multiple sequence alignment is the foundation of many important applications in bioinformatics that aim at detecting functionally important regions, predicting protein...
Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa ...