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» On How Developers Test Open Source Software Systems
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BMCBI
2005
122views more  BMCBI 2005»
13 years 8 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...
BMCBI
2007
200views more  BMCBI 2007»
13 years 8 months ago
Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data
Background: Genomic deletions and duplications are important in the pathogenesis of diseases, such as cancer and mental retardation, and have recently been shown to occur frequent...
Ágnes Baross, Allen D. Delaney, H. Irene Li...
ISMB
2007
13 years 11 months ago
A Chado case study: an ontology-based modular schema for representing genome-associated biological information
Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
Chris Mungall, David B. Emmert
CC
2002
Springer
145views System Software» more  CC 2002»
13 years 8 months ago
Forwarding in Attribute Grammars for Modular Language Design
Abstract. Forwarding is a technique for providing default attribute definitions in attribute grammars that is helpful in the modular implementation of programming languages. It com...
Eric Van Wyk, Oege de Moor, Kevin Backhouse, Paul ...
XPU
2004
Springer
14 years 2 months ago
An Agile Approach to a Legacy System
We describe how a small, successful, self-selected XP team approached a seemingly intractable problem with panache, flair and immodesty. We rewrote a legacy application by deliver...
Chris Stevenson, Andy Pols