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» On Querying Ontologies and Databases
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BMCBI
2007
217views more  BMCBI 2007»
13 years 7 months ago
OntologyWidget - a reusable, embeddable widget for easily locating ontology terms
Background: Biomedical ontologies are being widely used to annotate biological data in a computer-accessible, consistent and well-defined manner. However, due to their size and co...
Catherine Beauheim, Farrell Wymore, Michael Nitzbe...
DILS
2005
Springer
14 years 1 months ago
The Multiple Roles of Ontologies in the BioMediator Data Integration System
BioMediator is a data integration system that provides a common interface to multiple Internet-accessible databases containing information about genetics and molecular biology. Ont...
Peter Mork, Ron Shaker, Peter Tarczy-Hornoch
CORR
2011
Springer
144views Education» more  CORR 2011»
12 years 11 months ago
Rewriting Ontological Queries into Small Nonrecursive Datalog Programs
Abstract. We consider the setting of ontological database access, where an Abox is given in form of a relational database D and where a Boolean conjunctive query q has to be evalua...
Georg Gottlob, Thomas Schwentick
ESWS
2004
Springer
14 years 27 days ago
Reverse Engineering of Relational Databases to Ontologies
Abstract. We propose a novel approach to reverse engineering of relational databases to ontologies. Our approach is based on the idea that semantics of a relational database can be...
Irina Astrova
BMCBI
2008
121views more  BMCBI 2008»
13 years 7 months ago
OntoDas - a tool for facilitating the construction of complex queries to the Gene Ontology
Background: Ontologies such as the Gene Ontology can enable the construction of complex queries over biological information in a conceptual way, however existing systems to do thi...
Kieran O'Neill, Alexander García Castro, An...