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TC
2010
13 years 6 months ago
Network-on-Chip Hardware Accelerators for Biological Sequence Alignment
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
Souradip Sarkar, Gaurav Ramesh Kulkarni, Partha Pr...
BMCBI
2010
108views more  BMCBI 2010»
13 years 3 months ago
Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset
Background: Concomitant with the rise in the popularity of DNA microarrays has been a surge of proposed methods for the analysis of microarray data. Fully controlled "spike-i...
Qianqian Zhu, Jeffrey C. Miecznikowski, Marc S. Ha...
BMCBI
2006
122views more  BMCBI 2006»
13 years 8 months ago
Genome comparison using Gene Ontology (GO) with statistical testing
Background: Automated comparison of complete sets of genes encoded in two genomes can provide insight on the genetic basis of differences in biological traits between species. Gen...
Zhaotao Cai, Xizeng Mao, Songgang Li, Liping Wei
DSN
2009
IEEE
14 years 2 months ago
Spam detection in voice-over-IP calls through semi-supervised clustering
In this paper, we present an approach for detection of spam calls over IP telephony called SPIT in VoIP systems. SPIT detection is different from spam detection in email in that t...
Yu-Sung Wu, Saurabh Bagchi, Navjot Singh, Ratsamee...
EMSOFT
2005
Springer
14 years 1 months ago
A unified HW/SW interface model to remove discontinuities between HW and SW design
One major challenge in System-on-Chip (SoC) design is the definition and design of interfaces between hardware and software. Traditional ASIC designer and software designer model ...
Aimen Bouchhima, Xi Chen, Frédéric P...