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» On Sequence Prediction for Arbitrary Measures
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BMCBI
2005
97views more  BMCBI 2005»
13 years 7 months ago
Sequence variation in ligand binding sites in proteins
Background: The recent explosion in the availability of complete genome sequences has led to the cataloging of tens of thousands of new proteins and putative proteins. Many of the...
Thomas J. Magliery, Lynne Regan
BMCBI
2007
148views more  BMCBI 2007»
13 years 7 months ago
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
Background: This work addresses the problem of detecting conserved transcription factor binding sites and in general regulatory regions through the analysis of sequences from homo...
Giulio Pavesi, Federico Zambelli, Graziano Pesole
BMCBI
2004
196views more  BMCBI 2004»
13 years 7 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
ISPD
2003
ACM
79views Hardware» more  ISPD 2003»
14 years 26 days ago
Floorplanning of pipelined array modules using sequence pairs
Floorplanning individual pipelined array modules of a larger overall die can yield beneficial results. Critical paths in every pipeline stage of a pipelined design are roughly equ...
Matthew Moe, Herman Schmit
SAC
2010
ACM
14 years 2 months ago
Referrer graph: a low-cost web prediction algorithm
This paper presents the Referrer Graph (RG) web prediction algorithm as a low-cost solution to predict next web user accesses. RG is aimed at being used in a real web system with ...
B. de la Ossa, Ana Pont, Julio Sahuquillo, Jos&eac...