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3DPVT
2002
IEEE
121views Visualization» more  3DPVT 2002»
14 years 8 days ago
Analysis of Secondary Structure Elements of Proteins Using Indexing Techniques
In this paper we present a method for protein structure comparison that is based on indexing. Unlike most methods using indexing, ours does not use invariants of the C atoms of th...
Concettina Guerra, Stefano Lonardi, Giuseppe Zanot...
SIGECOM
2010
ACM
184views ECommerce» more  SIGECOM 2010»
14 years 3 days ago
Computing pure strategy nash equilibria in compact symmetric games
We analyze the complexity of computing pure strategy Nash equilibria (PSNE) in symmetric games with a fixed number of actions. We restrict ourselves to “compact” representati...
Christopher Thomas Ryan, Albert Xin Jiang, Kevin L...
BMCBI
2010
105views more  BMCBI 2010»
13 years 7 months ago
Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement
Background: The Medium-chain Dehydrogenases/Reductases (MDR) form a protein superfamily whose size and complexity defeats traditional means of subclassification; it currently has ...
Joel Hedlund, Hans Jörnvall, Bengt Persson
CORR
2010
Springer
139views Education» more  CORR 2010»
13 years 7 months ago
The Complexity of Satisfiability for Sub-Boolean Fragments of ALC
The standard reasoning problem, concept satisfiability, in the basic description logic ALC is PSPACE-complete, and it is EXPTIMEcomplete in the presence of unrestricted axioms. Sev...
Arne Meier, Thomas Schneider 0002
RECOMB
2008
Springer
14 years 7 months ago
Perfect DCJ Rearrangement
We study the problem of transforming a multichromosomal genome into another using Double-Cut-and-Join (DCJ) operations. We introduce the notion of DCJ scenario that does not break ...
Sèverine Bérard, Annie Chateau, Cedr...