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» On improving application utility prediction
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ACL
2007
13 years 11 months ago
Learning Predictive Structures for Semantic Role Labeling of NomBank
This paper presents a novel application of Alternating Structure Optimization (ASO) to the task of Semantic Role Labeling (SRL) of noun predicates in NomBank. ASO is a recently pr...
Chang Liu, Hwee Tou Ng
IPPS
2007
IEEE
14 years 4 months ago
Improving MPI Independent Write Performance Using A Two-Stage Write-Behind Buffering Method
Many large-scale production applications often have very long executions times and require periodic data checkpoints in order to save the state of the computation for program rest...
Wei-keng Liao, Avery Ching, Kenin Coloma, Alok N. ...
BMCBI
2010
118views more  BMCBI 2010»
13 years 10 months ago
Predicting nucleosome positioning using a duration Hidden Markov Model
Background: The nucleosome is the fundamental packing unit of DNAs in eukaryotic cells. Its detailed positioning on the genome is closely related to chromosome functions. Increasi...
Liqun Xi, Yvonne Fondufe-Mittendorf, Lei Xia, Jare...
BMCBI
2011
13 years 1 months ago
In-silico prediction of disorder content using hybrid sequence representation
Background: Intrinsically disordered proteins play important roles in various cellular activities and their prevalence was implicated in a number of human diseases. The knowledge ...
Marcin J. Mizianty, Tuo Zhang, Bin Xue, Yaoqi Zhou...
BMCBI
2007
134views more  BMCBI 2007»
13 years 10 months ago
Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...