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» On predicting secondary structure transition
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BIBE
2003
IEEE
124views Bioinformatics» more  BIBE 2003»
14 years 2 months ago
Prediction of Contact Maps Using Support Vector Machines
Contact map prediction is of great interest for its application in fold recognition and protein 3D structure determination. In this paper we present a contact-map prediction algor...
Ying Zhao, George Karypis
GECCO
2007
Springer
154views Optimization» more  GECCO 2007»
14 years 3 months ago
A novel ab-initio genetic-based approach for protein folding prediction
In this paper, a model based on genetic algorithms for protein folding prediction is proposed. The most important features of the proposed approach are: i) Heuristic secondary str...
Sergio Raul Duarte Torres, David Camilo Becerra Ro...
AROBOTS
2011
13 years 3 months ago
Human motion database with a binary tree and node transition graphs
— Database of human motion has been widely used for recognizing human motion and synthesizing humanoid motions. In this paper, we propose a data structure for storing and extract...
Katsu Yamane, Yoshifumi Yamaguchi, Yoshihiko Nakam...
JCB
2007
136views more  JCB 2007»
13 years 8 months ago
A Structure-Based Flexible Search Method for Motifs in RNA
The discovery of non-coding RNA (ncRNA) motifs and their role in regulating gene expression has recently attracted considerable attention. The goal is to discover these motifs in ...
Isana Veksler-Lublinsky, Michal Ziv-Ukelson, Danny...
ISMB
2004
13 years 10 months ago
Exploiting conserved structure for faster annotation of non-coding RNAs without loss of accuracy
Motivation: Non-coding RNAs (ncRNAs)--functional RNA molecules not coding for proteins--are grouped into hundreds of families of homologs. To find new members of an ncRNA gene fam...
Zasha Weinberg, Walter L. Ruzzo