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» On predicting secondary structure transition
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ISMB
1994
13 years 10 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe
KDD
2002
ACM
104views Data Mining» more  KDD 2002»
14 years 9 months ago
Generalization Methods in Bioinformatics
Protein secondary structure prediction and high-throughput drug screen data mining are two important applications in bioinformatics. The data is represented in sparse feature spac...
Steven Eschrich, Nitesh V. Chawla, Lawrence O. Hal...
BMCBI
2010
175views more  BMCBI 2010»
13 years 9 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
TIP
2011
123views more  TIP 2011»
13 years 3 months ago
Spatial Sparsity-Induced Prediction (SIP) for Images and Video: A Simple Way to Reject Structured Interference
We propose a prediction technique that is geared toward forming successful estimates of a signal based on a correlated anchor signal that is contaminated with complex interference...
Gang Hua, Onur G. Guleryuz
BMCBI
2007
139views more  BMCBI 2007»
13 years 9 months ago
Improving model predictions for RNA interference activities that use support vector machine regression by combining and filterin
Background: RNA interference (RNAi) is a naturally occurring phenomenon that results in the suppression of a target RNA sequence utilizing a variety of possible methods and pathwa...
Andrew S. Peek