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CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
14 years 4 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...
MSR
2005
ACM
14 years 4 months ago
Software repository mining with Marmoset: an automated programming project snapshot and testing system
Most computer science educators hold strong opinions about the “right” approach to teaching introductory level programming. Unfortunately, we have comparatively little hard ev...
Jaime Spacco, Jaymie Strecker, David Hovemeyer, Wi...
HICSS
2002
IEEE
148views Biometrics» more  HICSS 2002»
14 years 3 months ago
Barriers to a Wide-Area Trusted Network Early Warning System for Electric Power Disturbances
It is apparent that perturbations of the North American electric power grid follow the patterns and characteristics of Self Organized Critical (SOC) systems. Published studies sho...
Paul W. Oman, Jeff Roberts
BMCBI
2007
120views more  BMCBI 2007»
13 years 10 months ago
Re-sampling strategy to improve the estimation of number of null hypotheses in FDR control under strong correlation structures
Background: When conducting multiple hypothesis tests, it is important to control the number of false positives, or the False Discovery Rate (FDR). However, there is a tradeoff be...
Xin Lu, David L. Perkins
BMCBI
2007
131views more  BMCBI 2007»
13 years 10 months ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...