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» On the Boolean-Width of a Graph: Structure and Applications
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CIKM
2005
Springer
14 years 1 months ago
Semantic similarity over the gene ontology: family correlation and selecting disjunctive ancestors
Many bioinformatics applications would benefit from comparing proteins based on their biological role rather than their sequence. In most biological databases, proteins are alrea...
Francisco M. Couto, Mário J. Silva, Pedro C...
ESWS
2005
Springer
14 years 1 months ago
Web Explanations for Semantic Heterogeneity Discovery
Managing semantic heterogeneity is a complex task. One solution involves matching like terms to each other. We view Match as an operator that takes two graph-like structures (e.g....
Pavel Shvaiko, Fausto Giunchiglia, Paulo Pinheiro ...
GECCO
2005
Springer
124views Optimization» more  GECCO 2005»
14 years 1 months ago
Evolving petri nets to represent metabolic pathways
Given concentrations of metabolites over a sequence of time steps, the metabolic pathway prediction problem seeks a set of reactions and rate constants for them that could yield t...
Jeremiah Nummela, Bryant A. Julstrom
GECCO
2004
Springer
123views Optimization» more  GECCO 2004»
14 years 1 months ago
Heuristic Methods for Solving Euclidean Non-uniform Steiner Tree Problems
In this paper, we consider a variation of the Euclidean Steiner Tree Problem in which the space underlying the set of nodes has a specified non-uniform cost structure. This proble...
Ian Frommer, Bruce L. Golden, Guruprasad Pundoor
ISMIR
2004
Springer
124views Music» more  ISMIR 2004»
14 years 1 months ago
A Comparison of Rhythmic Similarity Measures
Measuring the similarity between rhythms is a fundamental problem in computational music theory, with many applications such as music information retrieval and copyright infringem...
Godfried T. Toussaint