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» On the Complexity of Universal Programs
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BMCBI
2006
98views more  BMCBI 2006»
13 years 10 months ago
Scanning sequences after Gibbs sampling to find multiple occurrences of functional elements
Background: Many DNA regulatory elements occur as multiple instances within a target promoter. Gibbs sampling programs for finding DNA regulatory elements de novo can be prohibiti...
Kannan Tharakaraman, Leonardo Mariño-Ram&ia...
CLUSTER
2006
IEEE
13 years 10 months ago
Optimizing MPI collective communication by orthogonal structures
Many parallel applications from scientific computing use MPI collective communication operations to collect or distribute data. Since the execution times of these communication op...
Matthias Kühnemann, Thomas Rauber, Gudula R&u...
CORR
2006
Springer
109views Education» more  CORR 2006»
13 years 10 months ago
On Conditional Branches in Optimal Decision Trees
The decision tree is one of the most fundamental ing abstractions. A commonly used type of decision tree is the alphabetic binary tree, which uses (without loss of generality) &quo...
Michael B. Baer
BMCBI
2007
148views more  BMCBI 2007»
13 years 10 months ago
fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng,...
CN
2007
168views more  CN 2007»
13 years 10 months ago
A MAC layer power management scheme for efficient energy delay tradeoff in a WLAN
— Energy efficient operation is of paramount importance for battery-powered wireless nodes. In an effort to conserve energy, standard protocols for WLANs have the provision for w...
Mahasweta Sarkar, Rene L. Cruz