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BMCBI
2011
13 years 4 months ago
DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI
Background: Next-generation sequencing technologies have led to the high-throughput production of sequence data (reads) at low cost. However, these reads are significantly shorter...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
SPRINGSIM
2008
13 years 10 months ago
Data parallel execution challenges and runtime performance of agent simulations on GPUs
Programmable graphics processing units (GPUs) have emerged as excellent computational platforms for certain general-purpose applications. The data parallel execution capabilities ...
Kalyan S. Perumalla, Brandon G. Aaby
ICDCSW
2005
IEEE
14 years 2 months ago
Reconciling the Theory and Practice of (Un)Reliable Wireless Broadcast
Theorists and practitioners have fairly different perspectives on how wireless broadcast works. Theorists think about synchrony; practitioners think about backoff. Theorists assum...
Gregory Chockler, Murat Demirbas, Seth Gilbert, Na...
VECPAR
2000
Springer
14 years 17 days ago
Finite/Discrete Element Analysis of Multi-fracture and Multi-contact Phenomena
A dynamic domain decomposition strategy is proposed for the effective parallel implementation of combined finite/discrete element approaches for problems involving multi-fracture a...
D. R. J. Owen, Y. T. Feng, Jianguo Yu, Djordje Per...
MICRO
2008
IEEE
159views Hardware» more  MICRO 2008»
14 years 3 months ago
Copy or Discard execution model for speculative parallelization on multicores
The advent of multicores presents a promising opportunity for speeding up sequential programs via profile-based speculative parallelization of these programs. In this paper we pr...
Chen Tian, Min Feng, Vijay Nagarajan, Rajiv Gupta