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BMCBI
2007
202views more  BMCBI 2007»
13 years 9 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
JCB
2008
106views more  JCB 2008»
13 years 9 months ago
Statistics of Random Protein Superpositions: p-Values for Pairwise Structure Alignment
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
James O. Wrabl, Nick V. Grishin
JMLR
2006
113views more  JMLR 2006»
13 years 9 months ago
On Inferring Application Protocol Behaviors in Encrypted Network Traffic
Several fundamental security mechanisms for restricting access to network resources rely on the ability of a reference monitor to inspect the contents of traffic as it traverses t...
Charles V. Wright, Fabian Monrose, Gerald M. Masso...
SIAMDM
2008
79views more  SIAMDM 2008»
13 years 9 months ago
Testing Triangle-Freeness in General Graphs
In this paper we consider the problem of testing whether a graph is triangle-free, and more generally, whether it is H-free, for a fixed subgraph H. The algorithm should accept gr...
Noga Alon, Tali Kaufman, Michael Krivelevich, Dana...
TEC
2008
115views more  TEC 2008»
13 years 9 months ago
Function Approximation With XCS: Hyperellipsoidal Conditions, Recursive Least Squares, and Compaction
An important strength of learning classifier systems (LCSs) lies in the combination of genetic optimization techniques with gradient-based approximation techniques. The chosen app...
Martin V. Butz, Pier Luca Lanzi, Stewart W. Wilson