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» On the Evolution of IMEDIA Implementations
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BMCBI
2010
135views more  BMCBI 2010»
13 years 9 months ago
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulens...
BMCBI
2007
140views more  BMCBI 2007»
13 years 9 months ago
From genes to functional classes in the study of biological systems
Background: With the popularisation of high-throughput techniques, the need for procedures that help in the biological interpretation of results has increased enormously. Recently...
Fátima Al-Shahrour, Leonardo Arbiza, Hern&a...
DEBU
2008
149views more  DEBU 2008»
13 years 8 months ago
Semantics enhanced Services: METEOR-S, SAWSDL and SA-REST
Services Research Lab at the Knoesis center and the LSDIS lab at University of Georgia have played a significant role in advancing the state of research in the areas of workflow m...
Amit P. Sheth, Karthik Gomadam, Ajith Ranabahu
BMCBI
2006
92views more  BMCBI 2006»
13 years 8 months ago
Recrafting the neighbor-joining method
Background: The neighbor-joining method by Saitou and Nei is a widely used method for constructing phylogenetic trees. The formulation of the method gives rise to a canonical (n3)...
Thomas Mailund, Gerth Stølting Brodal, Rolf...
BMCBI
2006
115views more  BMCBI 2006»
13 years 8 months ago
The accuracy of several multiple sequence alignment programs for proteins
Background: There have been many algorithms and software programs implemented for the inference of multiple sequence alignments of protein and DNA sequences. The "true" ...
Paulo A. S. Nuin, Zhouzhi Wang, Elisabeth R. M. Ti...