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» On the Forward Checking Algorithm
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133
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SECON
2008
IEEE
15 years 8 months ago
Practical Algorithms for Gathering Stored Correlated Data in a Network
—Many sensing systems remotely monitor/measure an environment at several sites, and then report these observations to a central site. We propose and investigate several practical...
Ramin Khalili, James F. Kurose
120
Voted
GECCO
2007
Springer
192views Optimization» more  GECCO 2007»
15 years 8 months ago
On the runtime analysis of the 1-ANT ACO algorithm
The runtime analysis of randomized search heuristics is a growing field where, in the last two decades, many rigorous results have been obtained. These results, however, apply pa...
Benjamin Doerr, Frank Neumann, Dirk Sudholt, Carst...
BMCBI
2006
112views more  BMCBI 2006»
15 years 2 months ago
Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins
Background: Hidden Markov Models (HMMs) have been extensively used in computational molecular biology, for modelling protein and nucleic acid sequences. In many applications, such...
Pantelis G. Bagos, Theodore D. Liakopoulos, Stavro...
SASP
2009
IEEE
291views Hardware» more  SASP 2009»
15 years 9 months ago
A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada
IWMM
2009
Springer
152views Hardware» more  IWMM 2009»
15 years 8 months ago
A new approach to parallelising tracing algorithms
Tracing algorithms visit reachable nodes in a graph and are central to activities such as garbage collection, marshalling etc. Traditional sequential algorithms use a worklist, re...
Cosmin E. Oancea, Alan Mycroft, Stephen M. Watt