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» On the Power of Computing with Proteins on Membranes
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CISS
2008
IEEE
14 years 3 months ago
Frames in bioimaging
We survey our work on adaptive multiresolution (MR) approaches to the classification of biological images. The system adds MR decomposition in front of a generic classifier cons...
Amina Chebira, Jelena Kovacevic
LPAR
2005
Springer
14 years 2 months ago
Comparative Similarity, Tree Automata, and Diophantine Equations
The notion of comparative similarity ‘X is more similar or closer to Y than to Z’ has been investigated in both foundational and applied areas of knowledge representation and r...
Mikhail Sheremet, Dmitry Tishkovsky, Frank Wolter,...
UAI
2008
13 years 10 months ago
Tightening LP Relaxations for MAP using Message Passing
Linear Programming (LP) relaxations have become powerful tools for finding the most probable (MAP) configuration in graphical models. These relaxations can be solved efficiently u...
David Sontag, Talya Meltzer, Amir Globerson, Tommi...
BMCBI
2007
94views more  BMCBI 2007»
13 years 8 months ago
False positive reduction in protein-protein interaction predictions using gene ontology annotations
Background: Many crucial cellular operations such as metabolism, signalling, and regulations are based on protein-protein interactions. However, the lack of robust protein-protein...
Mahmood A. Mahdavi, Yen-Han Lin
BMCBI
2006
102views more  BMCBI 2006»
13 years 8 months ago
UVPAR: fast detection of functional shifts in duplicate genes
Background: The imprint of natural selection on gene sequences is often difficult to detect. A plethora of methods have been devised to detect genetic changes due to selective pro...
Vicente Arnau, Miguel Gallach, J. Ignasi Lucas, Ig...