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» On the Power of Computing with Proteins on Membranes
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BMCBI
2006
143views more  BMCBI 2006»
13 years 8 months ago
Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences
Background: The estimation of the difference between two evolutionary distances within a triplet of homologs is a common operation that is used for example to determine which of t...
Christophe Dessimoz, Manuel Gil, Adrian Schneider,...
NAR
2011
290views Computer Vision» more  NAR 2011»
12 years 11 months ago
AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies
Phytohormone studies enlightened our knowledge of plant responses to various changes. To provide a systematic and comprehensive view of genes participating in plant hormonal regul...
Zhiqiang Jiang, Xiao-Chuan Liu, Zhiyu Peng, Yinan ...
ACML
2009
Springer
14 years 3 months ago
Community Detection on Weighted Networks: A Variational Bayesian Method
Abstract. Massive real-world data are network-structured, such as social network, relationship between proteins and power grid. Discovering the latent communities is a useful way f...
Qixia Jiang, Yan Zhang, Maosong Sun
ECCB
2003
IEEE
14 years 1 months ago
Gene networks inference using dynamic Bayesian networks
This article deals with the identification of gene regulatory networks from experimental data using a statistical machine learning approach. A stochastic model of gene interactio...
Bruno-Edouard Perrin, Liva Ralaivola, Aurél...
BMCBI
2005
130views more  BMCBI 2005»
13 years 8 months ago
Squid - a simple bioinformatics grid
Background: BLAST is a widely used genetic research tool for analysis of similarity between nucleotide and protein sequences. This paper presents a software application entitled &...
Paulo C. Carvalho, Rafael V. Glória, Antoni...