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DASFAA
2008
IEEE
188views Database» more  DASFAA 2008»
14 years 4 months ago
Summarization Graph Indexing: Beyond Frequent Structure-Based Approach
Graph is an important data structure to model complex structural data, such as chemical compounds, proteins, and XML documents. Among many graph data-based applications, sub-graph ...
Lei Zou, Lei Chen 0002, Huaming Zhang, Yansheng Lu...
BMCBI
2007
148views more  BMCBI 2007»
13 years 10 months ago
Blast sampling for structural and functional analyses
Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...
STACS
2009
Springer
14 years 4 months ago
Forward Analysis for WSTS, Part I: Completions
Well-structured transition systems provide the right foundation to compute a finite basis of the set of predecessors of the upward closure of a state. The dual problem, to compute...
Alain Finkel, Jean Goubault-Larrecq
DAGSTUHL
2008
13 years 11 months ago
Complete Interval Arithmetic and its Implementation
: Let IIR be the set of closed and bounded intervals of real numbers. Arithmetic in IIR can be defined via the power set IPIR of real numbers. If divisors containing zero are exclu...
Ulrich W. Kulisch
BMCBI
2004
208views more  BMCBI 2004»
13 years 10 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein