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» On the Subgroup Distance Problem
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JDA
2007
156views more  JDA 2007»
13 years 8 months ago
A linear time algorithm for the inversion median problem in circular bacterial genomes
In the median problem, we are given a distance or dissimilarity measure d, three genomes G1, G2, and G3, and we want to find a genome G (a median) such that the sum 3 i=1 d(G, Gi...
Enno Ohlebusch, Mohamed Ibrahim Abouelhoda, Kathri...
TCS
2002
13 years 8 months ago
The chords' problem
The chords' problem is a variant of an old problem of computational geometry: given a set of points of n , one can easily build the multiset of the distances between the poi...
Alain Daurat, Yan Gérard, Maurice Nivat
CORR
2011
Springer
214views Education» more  CORR 2011»
13 years 9 days ago
K-Median Clustering, Model-Based Compressive Sensing, and Sparse Recovery for Earth Mover Distance
We initiate the study of sparse recovery problems under the Earth-Mover Distance (EMD). Specifically, we design a distribution over m × n matrices A such that for any x, given A...
Piotr Indyk, Eric Price
CORR
2004
Springer
168views Education» more  CORR 2004»
13 years 8 months ago
Estimating Genome Reversal Distance by Genetic Algorithm
Sorting by reversals is an important problem in inferring the evolutionary relationship between two genomes. The problem of sorting unsigned permutation has been proven to be NP-ha...
Andy Auyeung, Ajith Abraham
NAR
2011
189views Computer Vision» more  NAR 2011»
12 years 11 months ago
EDULISS: a small-molecule database with data-mining and pharmacophore searching capabilities
We present the relational database EDULISS (EDinburgh University Ligand Selection System), which stores structural, physicochemical and pharmacophoric properties of small molecule...
Kun-Yi Hsin, Hugh P. Morgan, Steven R. Shave, Andr...