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» On the correlation of binary sequences
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114
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NAR
2006
107views more  NAR 2006»
15 years 3 months ago
CorGen - measuring and generating long-range correlations for DNA sequence analysis
CorGen is a web server that measures long-range correlations in the base composition of DNA and generates random sequences with the same correlation parameters. Long-range correla...
Philipp W. Messer, Peter F. Arndt
160
Voted
BMCBI
2011
14 years 7 months ago
In-silico prediction of disorder content using hybrid sequence representation
Background: Intrinsically disordered proteins play important roles in various cellular activities and their prevalence was implicated in a number of human diseases. The knowledge ...
Marcin J. Mizianty, Tuo Zhang, Bin Xue, Yaoqi Zhou...
118
Voted
PVLDB
2008
82views more  PVLDB 2008»
15 years 3 months ago
Mining non-redundant high order correlations in binary data
Many approaches have been proposed to find correlations in binary data. Usually, these methods focus on pair-wise correlations. In biology applications, it is important to find co...
Xiang Zhang, Feng Pan, Wei Wang 0010, Andrew B. No...
131
Voted
TCOM
2011
86views more  TCOM 2011»
14 years 10 months ago
New Bounds and Optimal Binary Signature Sets - Part I: Periodic Total Squared Correlation
—We derive new bounds on the periodic (cyclic) total squared correlation (PTSC) of binary antipodal signature sets for any number of signatures K and any signature length L. Opti...
Harish Ganapathy, Dimitrios A. Pados, George N. Ka...
ICC
2007
IEEE
15 years 10 months ago
New Bounds on the Aperiodic Total Squared Correlation of Binary Signature Sets and Optimal Designs
— We derive new bounds on the aperiodic total squared correlation (ATSC) of binary antipodal signature sets for any number of signatures K and any signature length L. We then pre...
Harish Ganapathy, Dimitrios A. Pados, George N. Ka...