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» On the distance between the expressions of a permutation
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BMCBI
2006
128views more  BMCBI 2006»
13 years 7 months ago
An interactive tool for visualization of relationships between gene expression profiles
Background: Application of phenetic methods to gene expression analysis proved to be a successful approach. Visualizing the results in a 3-dimentional space may further enhance th...
Peter Ruzanov, Steven J. M. Jones
BMCBI
2007
135views more  BMCBI 2007»
13 years 7 months ago
Measuring similarities between gene expression profiles through new data transformations
Background: Clustering methods are widely used on gene expression data to categorize genes with similar expression profiles. Finding an appropriate (dis)similarity measure is crit...
Kyungpil Kim, Shibo Zhang, Keni Jiang, Li Cai, In-...
COMBINATORICS
2004
81views more  COMBINATORICS 2004»
13 years 7 months ago
A Card Shuffling Analysis of Deformations of the Plancherel Measure of the Symmetric Group
This paper finds and analyzes a formula for the total variation distance between iterations of riffle shuffles and iterations of "cut and then riffle shuffle". This allo...
Jason E. Fulman
CPM
2009
Springer
189views Combinatorics» more  CPM 2009»
14 years 2 months ago
Average-Case Analysis of Perfect Sorting by Reversals
A sequence of reversals that takes a signed permutation to the identity is perfect if it preserves all common intervals between the permutation and the identity. The problem of com...
Mathilde Bouvel, Cedric Chauve, Marni Mishna, Domi...
ICPR
2006
IEEE
14 years 8 months ago
ICA-Based Clustering for Resolving Permutation Ambiguity in Frequency-Domain Convolutive Source Separation
Permutation ambiguity is an inherent limitation in independent component analysis, which is a bottleneck in frequency-domain methods of convolutive source separation. In this pape...
Minje Kim, Seungjin Choi