Background: Application of phenetic methods to gene expression analysis proved to be a successful approach. Visualizing the results in a 3-dimentional space may further enhance th...
Background: Clustering methods are widely used on gene expression data to categorize genes with similar expression profiles. Finding an appropriate (dis)similarity measure is crit...
Kyungpil Kim, Shibo Zhang, Keni Jiang, Li Cai, In-...
This paper finds and analyzes a formula for the total variation distance between iterations of riffle shuffles and iterations of "cut and then riffle shuffle". This allo...
A sequence of reversals that takes a signed permutation to the identity is perfect if it preserves all common intervals between the permutation and the identity. The problem of com...
Permutation ambiguity is an inherent limitation in independent component analysis, which is a bottleneck in frequency-domain methods of convolutive source separation. In this pape...