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HIPC
2009
Springer
13 years 5 months ago
Detailed analysis of I/O traces for large scale applications
- In this paper, we present a tool to extract I/O traces from very large applications running at full scale during their production runs. We analyze these traces to gain informatio...
Nithin Nakka, Alok N. Choudhary, Wei-keng Liao, Le...
CODES
2010
IEEE
13 years 5 months ago
Automatic parallelization of embedded software using hierarchical task graphs and integer linear programming
The last years have shown that there is no way to disregard the advantages provided by multiprocessor System-on-Chip (MPSoC) architectures in the embedded systems domain. Using mu...
Daniel Cordes, Peter Marwedel, Arindam Mallik
ICCMS
2009
118views more  ICCMS 2009»
13 years 5 months ago
Optimized Parallel Implementation of Gillespie's First Reaction Method on Graphics Processing Units
The simulation of chemical reacting systems is one of the most challenging topics in Systems Biology, due to their complexity and inherent randomness. The Gillespie's Stochas...
Cristian Dittamo, Davide Cangelosi
CLUSTER
2003
IEEE
14 years 20 days ago
Parallel Design Pattern for Computational Biology and Scientific Computing Applications
Dynamic programming is an important algorithm design technique in computational biology and scientific computing. Typical applications using this technique are very compute-intens...
Weiguo Liu, Bertil Schmidt
ISSAC
2007
Springer
99views Mathematics» more  ISSAC 2007»
14 years 1 months ago
Computing monodromy via parallel homotopy continuation
Numerical homotopy continuation gives a powerful tool for the applied scientist who seeks solutions to a system of polynomial equations. Techniques from numerical homotopy continu...
Anton Leykin, Frank Sottile