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» Ontology Based Analysis of Experimental Data
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BMCBI
2006
169views more  BMCBI 2006»
13 years 11 months ago
Finding biological process modifications in cancer tissues by mining gene expression correlations
Background: Through the use of DNA microarrays it is now possible to obtain quantitative measurements of the expression of thousands of genes from a biological sample. This techno...
Giacomo Gamberoni, Sergio Storari, Stefano Volinia
BMCBI
2006
216views more  BMCBI 2006»
13 years 11 months ago
Machine learning approaches to supporting the identification of photoreceptor-enriched genes based on expression data
Background: Retinal photoreceptors are highly specialised cells, which detect light and are central to mammalian vision. Many retinal diseases occur as a result of inherited dysfu...
Haiying Wang, Huiru Zheng, David Simpson, Francisc...
BMCBI
2007
133views more  BMCBI 2007»
13 years 11 months ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
BMCBI
2010
144views more  BMCBI 2010»
13 years 11 months ago
Identifying overrepresented concepts in gene lists from literature: a statistical approach based on Poisson mixture model
Background: Large-scale genomic studies often identify large gene lists, for example, the genes sharing the same expression patterns. The interpretation of these gene lists is gen...
Xin He, Moushumi Sen Sarma, Xu Ling, Brant W. Chee...
CSWWS
2006
14 years 2 months ago
Fulfilling the Needs of a Metadata Creator and Analyst- An Investigation of RDF Browsing and Visualization Tools
The realization of Semantic Web vision is based on the creation and use of semantic web content which needs software tools both for semantic web developers and end users. Over the ...
Shah Kushro, A. Min Tjoa