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    BMCBI
    2008
    127views more  BMCBI 2008»
    Gene and pathway identification with Lp penalized Bayesian logistic regression
    13 years 7 months ago
    Gene and pathway identification with Lp penalized Bayesian logistic regression
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    Background: Identifying genes and pathways associated with diseases such as cancer has been a subject of considerable research in recent years in the area of bioinformatics and co...
    Zhenqiu Liu, Ronald B. Gartenhaus, Ming Tan, Feng ...
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    ISCI
    2008
    130views more  ISCI 2008»
    Unified eigen analysis on multivariate Gaussian based estimation of distribution algorithms
    13 years 7 months ago
    Unified eigen analysis on multivariate Gaussian based estimation of distribution algorithms
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    Multivariate Gaussian models are widely adopted in continuous Estimation of Distribution Algorithms (EDAs), and covariance matrix plays the essential role in guiding the evolution...
    Weishan Dong, Xin Yao
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    BIBM
    2010
    IEEE
    158views Bioinformatics» more  BIBM 2010»
    Protein-protein interaction prediction via Collective Matrix Factorization
    13 years 5 months ago
    Protein-protein interaction prediction via Collective Matrix Factorization
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    Abstract--Protein-protein interactions (PPI) play an important role in cellular processes and metabolic processes within a cell. An important task is to determine the existence of ...
    Qian Xu, Evan Wei Xiang, Qiang Yang
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    BMCBI
    2010
    189views more  BMCBI 2010»
    Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
    13 years 7 months ago
    Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
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    Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
    Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
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    FCT
    2003
    Springer
    188views Applied Computing» more  FCT 2003»
    Graph Searching, Elimination Trees, and a Generalization of Bandwidth
    14 years 22 days ago
    Graph Searching, Elimination Trees, and a Generalization of Bandwidth
    Download  www.ii.uib.no
    The bandwidth minimization problem has a long history and a number of practical applications. In this paper we introduce a natural extension of bandwidth to partially ordered layo...
    Fedor V. Fomin, Pinar Heggernes, Jan Arne Telle
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