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» Ontology consolidation in bioinformatics
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BMCBI
2007
186views more  BMCBI 2007»
13 years 7 months ago
GeneBins: a database for classifying gene expression data, with application to plant genome arrays
Background: To interpret microarray experiments, several ontological analysis tools have been developed. However, current tools are limited to specific organisms. Results: We deve...
Nicolas Goffard, Georg Weiller
BMCBI
2008
158views more  BMCBI 2008»
13 years 7 months ago
Discovering gene annotations in biomedical text databases
Currently, most of the discovered biological and biomedical knowledge is available as textual data in scientific papers. And, locating and curating information about a genomic enti...
Ali Cakmak, Gultekin Özsoyoglu
BMCBI
2008
135views more  BMCBI 2008»
13 years 7 months ago
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining
Background: Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public r...
Irena Spasic, Daniel Schober, Susanna-Assunta Sans...
BIBE
2008
IEEE
115views Bioinformatics» more  BIBE 2008»
14 years 2 months ago
The Mouse Resource Browser (MRB) - A near-complete registry of mouse resources
—The Mouse Resource Browser MRB (http://bioit.fleming.gr/mrb) is an easy-to-use database for searching and retrieving mouse resource information. Currently, MRB hosts a list of 2...
Michael Zouberakis, C. Chandras, John M. Hancock, ...
BIBM
2008
IEEE
175views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources
We propose a novel approach for predicting protein functions of an organism by coupling sequence homology and PPI data between two (or more) species with multifunctional Gene Onto...
Antonina Mitrofanova, Vladimir Pavlovic, Bud Mishr...