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» Ontology mapping using background knowledge
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BMCBI
2006
135views more  BMCBI 2006»
13 years 11 months ago
TF Target Mapper: A BLAST search tool for the identification of Transcription Factor target genes
Background: In the current era of high throughput genomics a major challenge is the genome-wide identification of target genes for specific transcription factors. Chromatin immuno...
Sebastiaan Horsman, Michael J. Moorhouse, Victor C...
BMCBI
2010
191views more  BMCBI 2010»
13 years 11 months ago
BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions
Background: Genome-scale metabolic reconstructions under the Constraint Based Reconstruction and Analysis (COBRA) framework are valuable tools for analyzing the metabolic capabili...
Jan Schellenberger, Junyoung O. Park, Tom M. Conra...
CAISE
2005
Springer
14 years 4 months ago
A Meta Model for Process Mining Data
Abstract. Modern process-aware information systems store detailed information about processes as they are being executed. This kind of information can be used for very different p...
Boudewijn F. van Dongen, Wil M. P. van der Aalst
ELPUB
2008
ACM
14 years 20 days ago
A Semantic Web Powered Distributed Digital Library System
ResearchinHumanitiesandSocialSciencesistraditionallybasedonprintedpublicationssuchasmanuscripts, personal correspondence, first editions and other types of documents which are oft...
Michele Nucci, Michele Barbera, Christian Morbidon...
BMCBI
2008
135views more  BMCBI 2008»
13 years 11 months ago
Knowledge-guided multi-scale independent component analysis for biomarker identification
Background: Many statistical methods have been proposed to identify disease biomarkers from gene expression profiles. However, from gene expression profile data alone, statistical...
Li Chen, Jianhua Xuan, Chen Wang, Ie-Ming Shih, Yu...