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» Open MPI: A Flexible High Performance MPI
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CCGRID
2010
IEEE
13 years 8 months ago
An MPI-Stream Hybrid Programming Model for Computational Clusters
The MPI programming model hides network type and topology from developers, but also allows them to seamlessly distribute a computational job across multiple cores in both an intra ...
Emilio Pasquale Mancini, Gregory Marsh, Dhabaleswa...
PARELEC
2006
IEEE
14 years 1 months ago
Scientific Programming for Heterogeneous Systems - Bridging the Gap between Algorithms and Applications
High performance computing in heterogeneous environments is a dynamically developing area. A number of highly efficient heterogeneous parallel algorithms have been designed over l...
Alexey L. Lastovetsky
IPPS
2003
IEEE
14 years 20 days ago
A Framework for Portable Shared Memory Programming
Widespread adaptation of shared memory programming for High Performance Computing has been inhibited by a lack of standardization and the resulting portability problems between pl...
Martin Schulz, Sally A. McKee
ICSM
2007
IEEE
14 years 1 months ago
A Maintainable Software Architecture for Fast and Modular Bioinformatics Sequence Search
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...
Jeremy S. Archuleta, Eli Tilevich, Wu-chun Feng
EUROPAR
2004
Springer
14 years 23 days ago
Task-Queue Based Hybrid Parallelism: A Case Study
Abstract. In this paper we report on our experiences with hybrid parallelism in PARDISO, a high-performance sparse linear solver. We start with the OpenMP-parallel numerical factor...
Karl Fürlinger, Olaf Schenk, Michael Hagemann