327 search results - page 24 / 66 » Optimal detection of sequence similarity by local alignment |
BMCBI
2007
13 years 7 months ago
2007
Background: Profile Hidden Markov Models (HMM) are statistical representations of protein families derived from patterns of sequence conservation in multiple alignments and have b...
BIOCOMP
2009
2009
Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices
13 years 8 months ago
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
IPPS
2005
IEEE
14 years 1 months ago
2005
IEEE
The computational power needed for searching exponentially growing databases, such as GenBank, has increased dramatically. Three different implementations of the most widely used ...
BMCBI
2005
13 years 7 months ago
2005
Background: We introduce GASH, a new, publicly accessible program for structural alignment and superposition. Alignments are scored by the Number of Equivalent Residues (NER), a q...
ICMCS
2005
IEEE
14 years 1 months ago
2005
IEEE
The existing techniques for shot partitioning either process each shot boundary independently or proceed sequentially. The sequential process assumes the last shot boundary is cor...