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» Optimization and Simplification of Hierarchical Clusterings
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APBC
2004
13 years 8 months ago
Mega Weaver: A Simple Iterative Approach for BAC Consensus Assembly
Hierarchical genome assembly can be divided into three distinct stages: sequencing and assembling shotgun reads for each of a series of selected BAC clones; assembling the resulti...
Daolong Wang, Mario Lauria, Bo Yuan, Fred A. Wrigh...
BMCBI
2008
130views more  BMCBI 2008»
13 years 7 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
BMCBI
2008
80views more  BMCBI 2008»
13 years 7 months ago
Towards an automatic classification of protein structural domains based on structural similarity
Background: Formal classification of a large collection of protein structures aids the understanding of evolutionary relationships among them. Classifications involving manual ste...
Vichetra Sam, Chin-Hsien Tai, Jean Garnier, Jean-F...
GECCO
2008
Springer
143views Optimization» more  GECCO 2008»
13 years 8 months ago
How social structure and institutional order co-evolve beyond instrumental rationality
This study proposes an agent-based model where adaptively learning agents with local vision who are situated in the Prisoner’s Dilemma game change their strategy and location as...
Jae-Woo Kim
CVPR
2007
IEEE
14 years 9 months ago
Kernel Sharing With Joint Boosting For Multi-Class Concept Detection
Object/scene detection by discriminative kernel-based classification has gained great interest due to its promising performance and flexibility. In this paper, unlike traditional ...
Wei Jiang, Shih-Fu Chang, Alexander C. Loui