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» Optimizing Complex Loss Functions in Structured Prediction
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RECOMB
2007
Springer
14 years 9 months ago
Support Vector Training of Protein Alignment Models
Abstract. Sequence to structure alignment is an important step in homology modeling of protein structures. Incorporation of features like secondary structure, solvent accessibility...
Chun-Nam John Yu, Thorsten Joachims, Ron Elber, Ja...
BMCBI
2006
133views more  BMCBI 2006»
13 years 9 months ago
An integrated approach to the prediction of domain-domain interactions
Background: The development of high-throughput technologies has produced several large scale protein interaction data sets for multiple species, and significant efforts have been ...
Hyunju Lee, Minghua Deng, Fengzhu Sun, Ting Chen
MM
2009
ACM
187views Multimedia» more  MM 2009»
14 years 1 months ago
Convex experimental design using manifold structure for image retrieval
Content Based Image Retrieval (CBIR) has become one of the most active research areas in computer science. Relevance feedback is often used in CBIR systems to bridge the semantic ...
Lijun Zhang, Chun Chen, Wei Chen, Jiajun Bu, Deng ...
BMCBI
2008
137views more  BMCBI 2008»
13 years 9 months ago
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays
Background: Microarray experiments generate vast amounts of data. The functional context of differentially expressed genes can be assessed by querying the Gene Ontology (GO) datab...
Hans A. Kestler, André Müller, Johann ...
CIKM
2004
Springer
14 years 2 months ago
Hierarchical document categorization with support vector machines
Automatically categorizing documents into pre-defined topic hierarchies or taxonomies is a crucial step in knowledge and content management. Standard machine learning techniques ...
Lijuan Cai, Thomas Hofmann