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RECOMB
2010
Springer
13 years 6 months ago
Consistency of Sequence-Based Gene Clusters
In comparative genomics, various combinatorial models can be used to specify gene clusters — groups of genes that are co-located in a set of genomes. Several approaches have been...
Roland Wittler, Jens Stoye
WABI
2001
Springer
138views Bioinformatics» more  WABI 2001»
14 years 2 days ago
Algorithms for Finding Gene Clusters
Abstract. Comparing gene orders in completely sequenced genomes is a standard approach to locate clusters of functionally associated genes. Often, gene orders are modeled as permut...
Steffen Heber, Jens Stoye
FSTTCS
2006
Springer
13 years 11 months ago
On Continuous Timed Automata with Input-Determined Guards
We consider a general class of timed automata parameterized by a set of "input-determined" operators, in a continuous time setting. We show that for any such set of opera...
Fabrice Chevalier, Deepak D'Souza, Pavithra Prabha...
DCOSS
2006
Springer
13 years 11 months ago
Efficient In-Network Processing Through Local Ad-Hoc Information Coalescence
We consider in-network processing via local message passing. The considered setting involves a set of sensors each of which can communicate with a subset of other sensors. There is...
Onur Savas, Murat Alanyali, Venkatesh Saligrama
ATAL
2008
Springer
13 years 9 months ago
Coalitional skill games
We consider Coalitional Skill Games (CSGs), a simple model of cooperation among agents. This is a restricted form of coalitional games, where each agent has a set of skills that a...
Yoram Bachrach, Jeffrey S. Rosenschein