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» P Systems with Proteins on Membranes
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BMCBI
2007
144views more  BMCBI 2007»
13 years 7 months ago
Assessing the ability of sequence-based methods to provide functional insight within membrane integral proteins: a case study an
Background: Efforts to predict functional sites from globular proteins is increasingly common; however, the most successful of these methods generally require structural insight. ...
Dennis R. Livesay, Patrick D. Kidd, Sepehr Eskanda...
BMCBI
2010
133views more  BMCBI 2010»
13 years 7 months ago
Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical
Background: Many structural properties such as solvent accessibility, dihedral angles and helix-helix contacts can be assigned to each residue in a membrane protein. Independent s...
Shandar Ahmad, Yumlembam Hemjit Singh, Yogesh Paud...
BMCBI
2010
97views more  BMCBI 2010»
13 years 7 months ago
Incorporating significant amino acid pairs to identify O-linked glycosylation sites on transmembrane proteins and non-transmembr
Background: While occurring enzymatically in biological systems, O-linked glycosylation affects protein folding, localization and trafficking, protein solubility, antigenicity, bi...
Shu-An Chen, Tzong-Yi Lee, Yu-Yen Ou
MEMBRANE
2004
Springer
14 years 22 days ago
Evolution and Oscillation in P Systems: Applications to Biological Phenomena
Some computational aspects and behavioral patterns of P systems are considered, emphasizing dynamical properties that turn useful in characterizing the behavior of biological and b...
Vincenzo Manca, Luca Bianco, Federico Fontana
JALC
2006
95views more  JALC 2006»
13 years 7 months ago
On the Decidability of Model-Checking for P Systems
Membrane computing is a branch of molecular computing that aims to develop models and paradigms that are biologically motivated. It identifies an unconventional computing model, n...
Zhe Dang, Oscar H. Ibarra, Cheng Li, Gaoyan Xie