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» P Systems with Proteins on Membranes
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BMCBI
2008
167views more  BMCBI 2008»
13 years 7 months ago
Expression profiles of switch-like genes accurately classify tissue and infectious disease phenotypes in model-based classificat
Background: Large-scale compilation of gene expression microarray datasets across diverse biological phenotypes provided a means of gathering a priori knowledge in the form of ide...
Michael Gormley, Aydin Tozeren
BIOCOMP
2006
13 years 8 months ago
Combined QM/MM Studies of Binding Effect of Cytochrome P450cam to Putidaredoxin
Abstract - Combined QM/MM calculations of an activesite of Cytochrome P450cam have been performed, before and after a binding process of Cytochrome P450cam to Putidaredoxin. The ca...
Marek Freindorf, Yihan Shao, Jing Kong, Thomas R. ...
NAR
2011
274views Computer Vision» more  NAR 2011»
13 years 2 months ago
A series of PDB related databases for everyday needs
The Protein Data Bank (PDB) is the world-wide repository of macromolecular structure information. We present a series of databases that run parallel to the PDB. Each database hold...
Robbie P. Joosten, Tim A. H. te Beek, Elmar Kriege...
BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
13 years 7 months ago
Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
Antonina Mitrofanova, Samantha Kleinberg, Jane Car...
KDD
2003
ACM
142views Data Mining» more  KDD 2003»
14 years 7 months ago
Extracting information from text and images for location proteomics
There is extensive interest in automating the collection, organization and summarization of biological data. Data in the form of figures and accompanying captions in literature pr...
Zhenzhen Kou, William W. Cohen, Robert F. Murphy