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» PIES, A Protein Interaction Extraction System
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BMCBI
2010
162views more  BMCBI 2010»
13 years 7 months ago
Moara: a Java library for extracting and normalizing gene and protein mentions
Background: Gene/protein recognition and normalization are important preliminary steps for many biological text mining tasks, such as information retrieval, protein-protein intera...
Mariana L. Neves, José María Carazo,...
VISUALIZATION
1996
IEEE
13 years 11 months ago
Three Dimensional Visualization of Proteins in Cellular Interactions
In researching the communication mechanisms between cells of the immune system, visualization of proteins in three dimensions can be used to determine which proteins are capable o...
Colin R. F. Monks, Patricia Crossno, George S. Dav...
AIMSA
2004
Springer
14 years 1 months ago
PubMiner: Machine Learning-Based Text Mining System for Biomedical Information Mining
PubMiner, an intelligent machine learning based text mining system for mining biological information from the literature is introduced. PubMiner utilize natural language processing...
Jae-Hong Eom, Byoung-Tak Zhang
BMCBI
2010
136views more  BMCBI 2010»
13 years 7 months ago
A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles
Background: Many research results show that the biological systems are composed of functional modules. Members in the same module usually have common functions. This is useful inf...
Chia-Hao Chin, Shu-Hwa Chen, Chin-Wen Ho, Ming-Tat...
IJMI
2002
108views more  IJMI 2002»
13 years 7 months ago
Learning anchor verbs for biological interaction patterns from published text articles
: Much of knowledge modeling in the molecular biology domain involves interactions between proteins, genes, various forms of RNA, small molecules, etc. Interactions between these s...
Vasileios Hatzivassiloglou, Wubin Weng