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    » PIR-ALN: a database of protein sequence alignments
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    BMCBI
    2006
    137views more  BMCBI 2006»
    Improving the accuracy of protein secondary structure prediction using structural alignment
    13 years 7 months ago
    Improving the accuracy of protein secondary structure prediction using structural alignment
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    Background: The accuracy of protein secondary structure prediction has steadily improved over the past 30 years. Now many secondary structure prediction methods routinely achieve ...
    Scott Montgomerie, Shan Sundararaj, Warren J. Gall...
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    AAAI
    2004
    131views Intelligent Agents» more  AAAI 2004»
    PROBCONS: Probabilistic Consistency-Based Multiple Alignment of Amino Acid Sequences
    13 years 9 months ago
    PROBCONS: Probabilistic Consistency-Based Multiple Alignment of Amino Acid Sequences
    Download  www.aaai.org
    Obtaining an accurate multiple alignment of protein sequences is a difficult computational problem for which many heuristic techniques sacrifice optimality to achieve reasonable r...
    Chuong B. Do, Michael Brudno, Serafim Batzoglou
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    BMCBI
    2007
    156views more  BMCBI 2007»
    Accuracy of structure-based sequence alignment of automatic methods
    13 years 7 months ago
    Accuracy of structure-based sequence alignment of automatic methods
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    Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
    Changhoon Kim, Byungkook Lee
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    NAR
    2007
    109views more  NAR 2007»
    GeneTrees: a phylogenomics resource for prokaryotes
    13 years 7 months ago
    GeneTrees: a phylogenomics resource for prokaryotes
    Download  nar.oxfordjournals.org
    The GeneTrees phylogenomics system pursues comparative genomic analyses from the perspective of gene phylogenies for individual genes. The GeneTrees project has the goal of provid...
    Yuying Tian, Allan W. Dickerman
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    ENGL
    2008
    121views more  ENGL 2008»
    Prediction of Protein-Protein Interactions Using Pairwise Alignment and Inter-Domain Linker Region
    13 years 7 months ago
    Prediction of Protein-Protein Interactions Using Pairwise Alignment and Inter-Domain Linker Region
    Download  www.engineeringletters.com
    One of the central problems in modern biology is to identify the complete set of interactions among the proteins in a cell. The structural interaction of proteins and their domains...
    Nazar Zaki
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