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BMCBI
2008
128views more  BMCBI 2008»
13 years 9 months ago
SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically drive
Background: Many programs have been developed to identify transcription factor binding sites. However, most of them are not able to infer two-word motifs with variable spacer leng...
Fabrice Touzain, Sophie Schbath, Isabelle Debled-R...
ICSE
2003
IEEE-ACM
14 years 9 months ago
DADO: Enhancing Middleware to Support Crosscutting Features in Distributed, Heterogeneous Systems
Some "non-' or "extra-functional" features, such as reliability, security, and tracing, defy modularization mechanisms in programming languages. This makes suc...
Eric Wohlstadter, Stoney Jackson, Premkumar T. Dev...
ASPLOS
2010
ACM
14 years 4 months ago
Dynamically replicated memory: building reliable systems from nanoscale resistive memories
DRAM is facing severe scalability challenges in sub-45nm technology nodes due to precise charge placement and sensing hurdles in deep-submicron geometries. Resistive memories, suc...
Engin Ipek, Jeremy Condit, Edmund B. Nightingale, ...
WEA
2010
Springer
330views Algorithms» more  WEA 2010»
14 years 4 months ago
Exact Bipartite Crossing Minimization under Tree Constraints
A tanglegram consists of a pair of (not necessarily binary) trees T1, T2 with leaf sets L1, L2. Additional edges, called tangles, may connect nodes in L1 with those in L2. The task...
Frank Baumann, Christoph Buchheim, Frauke Liers
CIKM
2009
Springer
14 years 3 months ago
Tree-pattern-based duplicate code detection
This paper presents a tree-pattern-based method of automatically and accurately finding code clones in program files. Duplicate tree-patterns are first collected by anti-unificati...
Hyo-Sub Lee, Kyung-Goo Doh