11 search results - page 1 / 3 » Pairwise Local Alignment of Protein Interaction Networks Gui... |
RECOMB
2005
Springer
14 years 7 months ago
2005
Springer
Abstract. With ever increasing amount of available data on protein-protein interaction (PPI) networks and research revealing that these networks evolve at a modular level, discover...
RECOMB
2007
Springer
14 years 7 months ago
2007
Springer
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
BMCBI
2008
13 years 7 months ago
2008
Background: Confidence in pairwise alignments of biological sequences, obtained by various methods such as Blast or Smith-Waterman, is critical for automatic analyses of genomic d...
LION
2009
Springer
14 years 2 months ago
2009
Springer
We present a new knowledge-based Model Quality Assessment Program (MQAP) at the residue level which evaluates single protein structure models. We use a tree representation of the ...
BMCBI
2008
13 years 7 months ago
2008
Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...