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JCPHY
2011
192views more  JCPHY 2011»
12 years 10 months ago
Fast analysis of molecular dynamics trajectories with graphics processing units - Radial distribution function histogramming
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...
Benjamin G. Levine, John E. Stone, Axel Kohlmeyer
IPPS
2007
IEEE
14 years 1 months ago
Experience of Optimizing FFT on Intel Architectures
Automatic library generators, such as ATLAS [11], Spiral [8] and FFTW [2], are promising technologies to generate efficient code for different computer architectures. The library...
Daniel Orozco, Liping Xue, Murat Bolat, Xiaoming L...
DATE
2006
IEEE
120views Hardware» more  DATE 2006»
14 years 1 months ago
System-level scheduling on instruction cell based reconfigurable systems
This paper presents a new operation chaining reconfigurable scheduling algorithm (CRS) based on list scheduling that maximizes instruction level parallelism available in distribut...
Ying Yi, Ioannis Nousias, Mark Milward, Sami Khawa...
IPPS
2003
IEEE
14 years 19 days ago
Applying Aspect-Orient Programming Concepts to a Component-Based Programming Model
Abstract— The execution environments For scientific applications have evolved significantly over the years. Vector and parallel architectures have provided significantly faste...
Thomas Eidson, Jack Dongarra, Victor Eijkhout
CHES
2009
Springer
162views Cryptology» more  CHES 2009»
14 years 7 months ago
Hardware Accelerator for the Tate Pairing in Characteristic Three Based on Karatsuba-Ofman Multipliers
Abstract. This paper is devoted to the design of fast parallel accelerators for the cryptographic Tate pairing in characteristic three over supersingular elliptic curves. We propos...
Jean-Luc Beuchat, Jérémie Detrey, Ni...