Upon completion of the human and mouse genome sequences, world-wide sequencing capacity will turn to other complex organisms. Current strategies call for many of these genomes to ...
The bandwidth minimization problem has a long history and a number of practical applications. In this paper we introduce a natural extension of bandwidth to partially ordered layo...
Speedups demonstrated for finding the biconnected components of a graph: 9x to 33x on the Explicit Multi-Threading (XMT) many-core computing platform relative to the best serial ...
We develop a serial algorithm for separable median filtering that requires only two comparisons per element when the window size is three. In addition, fast parallel CREW PRAM al...
We develop new structural results for apex-minor-free graphs and show their power by developing two new approximation algorithms. The first is an additive approximation for colorin...
Erik D. Demaine, MohammadTaghi Hajiaghayi, Ken-ich...