418 search results - page 5 / 84 » Parallel Computation in Biological Sequence Analysis |
VLSISP
2010
13 years 2 months ago
2010
We propose a new parallelization scheme for the hmmsearch function of the HMMER software, in order to target FPGA technology. hmmsearch is a very compute intensive software for bio...
CCECE
2006
IEEE
14 years 1 months ago
2006
IEEE
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
IPPS
2007
IEEE
14 years 2 months ago
2007
IEEE
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
IPPS
2007
IEEE
14 years 2 months ago
2007
IEEE
1 Multi-paradigm, multi-threaded and multi-core computing devices available today provide several orders of magnitude performance improvement over mainstream microprocessors. These...
SP
2008
IEEE
13 years 7 months ago
2008
IEEE
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...