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RECOMB
2004
Springer
14 years 7 months ago
Comparing in situ mRNA expression patterns of drosophila embryos
In situ staining of a target mRNA at several time points during the development of a D. melanogaster embryo gives one a detailed spatio-temporal view of the expression pattern of ...
Hanchuan Peng, Eugene W. Myers
FM
2006
Springer
172views Formal Methods» more  FM 2006»
13 years 11 months ago
The Embedded Systems Design Challenge
We summarize some current trends in embedded systems design and point out some of their characteristics, such as the chasm between analytical and computational models, and the gap ...
Thomas A. Henzinger, Joseph Sifakis
FCCM
2007
IEEE
117views VLSI» more  FCCM 2007»
14 years 1 months ago
FPGA Acceleration of Gene Rearrangement Analysis
In this paper we present our work toward FPGA acceleration of phylogenetic reconstruction, a type of analysis that is commonly performed in the fields of systematic biology and co...
Jason D. Bakos
ISMB
1993
13 years 8 months ago
Protein Sequencing Experiment Planning Using Analogy
Experiment design and execution is a central activity in the natural sciences. The SeqERsystem provides a general architecture for the integration of automated planning techniques...
Brian P. Kettler, Lindley Darden
HPDC
2010
IEEE
13 years 8 months ago
LogGOPSim: simulating large-scale applications in the LogGOPS model
We introduce LogGOPSim--a fast simulation framework for parallel algorithms at large-scale. LogGOPSim utilizes a slightly extended version of the well-known LogGPS model in combin...
Torsten Hoefler, Timo Schneider, Andrew Lumsdaine