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VL
2005
IEEE
104views Visual Languages» more  VL 2005»
14 years 1 months ago
Using a Molecular Metaphor to Facilitate Comprehension of 3D Object Diagrams
This paper presents a strategy for the visualization of dynamic object relationships in Java programs. The metaphor of a chemical molecule is used to aid comprehension, and to hel...
Brian A. Malloy, James F. Power
FCCM
2006
IEEE
201views VLSI» more  FCCM 2006»
13 years 11 months ago
Hardware/Software Approach to Molecular Dynamics on Reconfigurable Computers
With advances in reconfigurable hardware, especially field-programmable gate arrays (FPGAs), it has become possible to use reconfigurable hardware to accelerate complex applicatio...
Ronald Scrofano, Maya Gokhale, Frans Trouw, Viktor...
PC
1998
202views Management» more  PC 1998»
13 years 7 months ago
BSPlib: The BSP programming library
BSPlib is a small communications library for bulk synchronous parallel (BSP) programming which consists of only 20 basic operations. This paper presents the full de nition of BSPl...
Jonathan M. D. Hill, Bill McColl, Dan C. Stefanesc...
COMPGEOM
2005
ACM
13 years 9 months ago
Dynamic maintenance of molecular surfaces under conformational changes
We present an efficient algorithm for maintaining the boundary and surface area of protein molecules as they undergo conformational changes. We also describe a robust implementati...
Eran Eyal, Dan Halperin
JCSS
2008
81views more  JCSS 2008»
13 years 7 months ago
A simulator for adaptive parallel applications
Dynamically allocating computing nodes to parallel applications is a promising technique for improving the utilization of cluster resources. Detailed simulations can help identify...
Basile Schaeli, Sebastian Gerlach, Roger D. Hersch