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ICPPW
2006
IEEE
14 years 1 months ago
Dynamic Algorithm Selection in Parallel GAMESS Calculations
Applications augmented with adaptive capabilities are becoming common in parallel computing environments which share resources such as main memory, network, or disk I/O. For large...
Nurzhan Ustemirov, Masha Sosonkina, Mark S. Gordon...
BMCBI
2007
152views more  BMCBI 2007»
13 years 7 months ago
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography
Background: Coalescent simulations have proven very useful in many population genetics studies. In order to arrive to meaningful conclusions, it is important that these simulation...
Miguel Arenas, David Posada
IPPS
2007
IEEE
14 years 1 months ago
On the Path to Enable Multi-scale Biomolecular Simulations on PetaFLOPS Supercomputer with Multi-core Processors
1 Biological processes occurring inside cell involve multiple scales of time and length; many popular theoretical and computational multi-scale techniques utilize biomolecular simu...
Sadaf R. Alam, Pratul K. Agarwal
IPPS
2007
IEEE
14 years 1 months ago
A Multi-Level Parallel Implementation of a Program for Finding Frequent Patterns in a Large Sparse Graph
Graphs capture the essential elements of many problems broadly defined as searching or categorizing. With the rapid increase of data volumes from sensors, many application discipl...
Steve Reinhardt, George Karypis
ICPP
1995
IEEE
13 years 11 months ago
Progress: A Toolkit for Interactive Program Steering
Interactive program steering permits researchers to monitor and guide their applications during runtime. Interactive steering can help make end users more effective in addressing ...
Jeffrey S. Vetter, Karsten Schwan