State-of-the-art molecular dynamics (MD) simulations generate massive datasets involving billion-vertex chemical bond networks, which makes data mining based on graph algorithms s...
Cheng Zhang, Bhupesh Bansal, Paulo S. Branicio, Ra...
Abstract. Parallel Computational Science and Engineering (CSE) applications often exhibit irregular structure and dynamic load patterns. Many such applications have been developed ...
Predicting the running time of a parallel program is useful for determining the optimal values for the parameters of the implementation and the optimal mapping of data on processo...
Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...
— Recent progress in the algorithm as well as the processor power have made the dynamics simulation of complex kinematic chains more realistic in various fields such as human mo...