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DNA
2004
Springer
14 years 29 days ago
Efficient Initial Pool Generation for Weighted Graph Problems Using Parallel Overlap Assembly
Most DNA computing algorithms for mathematical problems start with combinatorial generation of an initial pool. Several methods for initialpool generation have been proposed, inclu...
Ji Youn Lee, Hee-Woong Lim, Suk-In Yoo, Byoung-Tak...
PDPTA
2003
13 years 9 months ago
Parallel Split-Step Fourier Methods for the CMKdV Equation
The class of complex modified Korteweg-de Vries (CMKdV) equations has many applications. One form of the CMKdV equation has been used to create models for the nonlinear evolution...
Thiab R. Taha, Ruihua Liu
PLDI
2012
ACM
11 years 10 months ago
Scalable and precise dynamic datarace detection for structured parallelism
Existing dynamic race detectors suffer from at least one of the following three limitations: (i) space overhead per memory location grows linearly with the number of parallel thre...
Raghavan Raman, Jisheng Zhao, Vivek Sarkar, Martin...
ISCA
2006
IEEE
138views Hardware» more  ISCA 2006»
14 years 1 months ago
Program Demultiplexing: Data-flow based Speculative Parallelization of Methods in Sequential Programs
We present Program Demultiplexing (PD), an execution paradigm that creates concurrency in sequential programs by "demultiplexing" methods (functions or subroutines). Cal...
Saisanthosh Balakrishnan, Gurindar S. Sohi
BMCBI
2010
141views more  BMCBI 2010»
13 years 7 months ago
BioPhysConnectoR: Connecting Sequence Information and Biophysical Models
Background: One of the most challenging aspects of biomolecular systems is the understanding of the coevolution in and among the molecule(s). A complete, theoretical picture of th...
Franziska Hoffgaard, Philipp Weil, Kay Hamacher