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» Parallel Multiple Sequence Alignment Using Speculative Compu...
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144
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SPAA
2009
ACM
16 years 2 months ago
A lightweight in-place implementation for software thread-level speculation
Thread-level speculation (TLS) is a technique that allows parts of a sequential program to be executed in parallel. TLS ensures the parallel program's behaviour remains true ...
Cosmin E. Oancea, Alan Mycroft, Tim Harris
134
Voted
BMCBI
2007
126views more  BMCBI 2007»
15 years 2 months ago
Multiple non-collinear TF-map alignments of promoter regions
Background: The analysis of the promoter sequence of genes with similar expression patterns is a basic tool to annotate common regulatory elements. Multiple sequence alignments ar...
Enrique Blanco, Roderic Guigó, Xavier Messe...
CF
2007
ACM
15 years 6 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...
IEEEPACT
2002
IEEE
15 years 7 months ago
Cost Effective Memory Dependence Prediction using Speculation Levels and Color Sets
Memory dependence prediction allows out-of-order issue processors to achieve high degrees of instruction level parallelism by issuing load instructions at the earliest time withou...
Soner Önder
RAID
2009
Springer
15 years 8 months ago
Multi-byte Regular Expression Matching with Speculation
Intrusion prevention systems determine whether incoming traffic matches a database of signatures, where each signature in the database represents an attack or a vulnerability. IPSs...
Daniel Luchaup, Randy Smith, Cristian Estan, Somes...