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RSA
2010
98views more  RSA 2010»
13 years 5 months ago
Network delay inference from additive metrics
We demonstrate the use of computational phylogenetic techniques to solve a central problem in inferential network monitoring. More precisely, we design a novel algorithm for multi...
Shankar Bhamidi, Ram Rajagopal, Sébastien R...
BIBE
2010
IEEE
181views Bioinformatics» more  BIBE 2010»
13 years 8 months ago
Multi Level Clustering of Phylogenetic Profiles
The prediction of gene function from genome sequences is one of the main issues in Bioinformatics. Most computational approaches are based on the similarity between sequences to in...
Fotis E. Psomopoulos, Pericles A. Mitkas
PCI
2005
Springer
14 years 16 days ago
Initial Experiences Porting a Bioinformatics Application to a Graphics Processor
Bioinformatics applications are one of the most relevant and compute-demanding applications today. While normally these applications are executed on clusters or dedicated parallel ...
Maria Charalambous, Pedro Trancoso, Alexandros Sta...
JSC
2006
83views more  JSC 2006»
13 years 7 months ago
Phylogenetic invariants for stationary base composition
Changing base composition during the evolution of biological sequences can mislead some of the phylogenetic inference techniques in current use. However, detecting whether such a ...
Elizabeth S. Allman, John A. Rhodes
APBC
2004
132views Bioinformatics» more  APBC 2004»
13 years 8 months ago
Identifying Character Non-Independence in Phylogenetic Data Using Data Mining Techniques
Undiscovered relationships in a data set may confound analyses, particularly those that assume data independence. Such problems occur when characters used for phylogenetic analyse...
Anne M. Maglia, Jennifer L. Leopold, Venkat Ram Gh...